gosling.VcfData#

class gosling.VcfData(indexUrl=Undefined, type=Undefined, url=Undefined, sampleLength=Undefined, **kwds)#

VcfData schema wrapper

Mapping(required=[type, url, indexUrl]) The Variant Call Format (VCF).

Attributes:
indexUrlstring

URL link to the tabix index file

typestring
urlstring

URL link to the VCF file

sampleLengthfloat

The maximum number of rows to be loaded from the URL. __Default:__ 1000

__init__(indexUrl=Undefined, type=Undefined, url=Undefined, sampleLength=Undefined, **kwds)#

Methods

__init__([indexUrl, type, url, sampleLength])

copy([deep, ignore])

Return a copy of the object

from_dict(dct[, validate, _wrapper_classes])

Construct class from a dictionary representation

from_json(json_string[, validate])

Instantiate the object from a valid JSON string

resolve_references([schema])

Resolve references in the context of this object's schema or root schema.

to_dict([validate, ignore, context])

Return a dictionary representation of the object

to_json([validate, ignore, context, indent, ...])

Emit the JSON representation for this object as a string.

validate(instance[, schema])

Validate the instance against the class schema in the context of the rootschema.

validate_property(name, value[, schema])

Validate a property against property schema in the context of the rootschema